If you think characters and logic need to be on different quoting levels, you're not taking the right perspective on regular expressions. \d or \w are not an escaped d or w, they are their own atoms (or "the keywords of the language", if you will), distinct from the atoms that match the ASCII characters 0x64 and 0x77. The thing to remember with regular expressions is always the first lesson presented: (non-meta) characters match themselves, the regular expression /a/ matches the letter a. What's implied here, but rarely said, is that that's not really the letter a in there, but rather an expression that matches the letter a—it just so happens to also look like the thing it matches. This distinction is subtle, but important. This can also be made more evident by using the /x modifier if it's available to spread out the individual expressions (put space between the keywords).
The primary difference in regular expression languages is often how "logic", as you call it, is expressed. PCRE considers, for example, [ to be the character for opening a character class and \[ to match the byte 0x5b. Admittedly, this is confusing when switching engines because 1) not every character matches itself (the expression that matches a character and the character it matches are not visually the same) and 2) other RE engines have taken the opposite approach depending on if that engine was meant, by the author, to have more literal atoms or more logic in its most common use (that is, you save typing if you mean to match the byte 0x5b more frequently than if you mean to open a character class).
As for "quoting", you almost NEVER should be using things like PCRE's \Q…\E (or the quotemeta function) unless you're building regular expressions dynamically from user-input. quotemeta and friends are not readability tools, but safety tools.