The more likely reason is that there simply hasn't been that big a push for it. Ruby was dog slow before the JIT and Rails was very popular, so there was a lot of demand and room for improvement. PHP was the primary language used by Facebook for a long time, and they had deep pockets. JS powers the web, so there's a huge incentive for companies like Google to make it faster. Python never really had that same level of investment, at least from a performance standpoint.

To your point, though, the C API has made certain types of optimizations extremely difficult, as the PyPy team has figured out.