The obvious generic challenges are availability and security: Firefox has contributors around the globe and if the VCS server goes down then it's hard to get work done (yes, you can work locally, but you can't land patches or ship fixes to users). Firefox is also a pretty high value target, and an attacker with access to the VCS server would be a problem.
To be clear I'm not claiming that there were specific problems related to these things; just that they represent challenges that Mozilla has to deal with when self hosting.
The other obvious problem at scale is performance. With a large repo both read and write performance are concerns. Cloning the repo is the first step that new contributors need to take, and if that's slow then it can be a dealbreaker for many people, especially on less reliable internet. Out hg backend was using replication to help with this [1], but you can see from the link how much complexity that adds.
Firefox has enough contributors that write contention also becomes a problem; for example pushing to the "try" repo (to run local patches through CI) often ended up taking tens of minutes waiting for a lock. This was (recently) mostly hidden from end users by pushing patches through a custom "lando" system that asynchronously queues the actual VCS push rather than blocking the user locally, but that's more of a mitigation than a real solution (lando is still required with the GitHub backend because it becomes the places where custom VCS rules which previously lived directly in the hg server, but which don't map onto GitHub features, are enforced).
[1] https://mozilla-version-control-tools.readthedocs.io/en/late...