Addressing the concern of the actual article:
The fact is that you can't escape from having researchers having some kind of tie to their subject matter, on one side of an issue or another.
The reason that people have chosen a given area of research is that they've got some kind of interest in it -- for or against. There's really no way around this, and so we rely on openness of results, and the peer review process to police research.
The same problem looms in governmental regulation, where regulatory capture [1] is an unavoidable problem. If you want someone to write regulations who actually knows what the heck they're doing, you're going to have to go with someone who got experience from somewhere, which is more than likely from working in the industry. The problem here, of course, is that there is no openness nor peer review in regulation.
