A ChromeOS user isn't apt-get installing binaries or copy/pasting bash one liners from Github. If you enable the Linux dev environment, that also runs in an isolated VM with a much more limited attack surface vs say an out of the box Ubuntu install. Both the Android VM and Linux VM can and routinely are blocked by MDM in school or work contexts.
You could lock down a Linux install with SELinux policies and various other restrictions but on ChromeOS it's the default mode that 99% of users are protected by (or limited by depending on your perspective).