IMHO filesystem efficiency questions never arise for bookmarks of a user of a computer. If one day you want to do some data mining on your 10k bookmarks, it will probably take < 1 second, even if done with Python.
Do you see a real-life situation for which reading a .url in 1 µs instead of 100 µs would make any difference?
(If you're speaking about search/querying, then the OS search feature does it for us)
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