Why do you say taxpayers must pay the license fee? A company might be happy to pay a royalty on a patent but as it is now patent law allows a patent holder to prevent anyone from making or using a patented invention - in other words they could sue Maya directly for infringement. Music copyright law, which issues from the exact same clause in the constitution as patent law, provides for a compulsory license of any song. A band knows before hand exactly how much it will cost to "cover" someone's song.
If you are found to be infringing a patent your financial exposure is almost un-bounded. If there were a compulsory license provision in patent law like their is in music copyright, companies would know exactly how much they were risking if found to be infringing a patent
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