The issue is that data disks and system disks get conflated. For the system disk (anything outside of /home) you generally only care about signing - which FDE does as a side-effect. Each user should have their own disk/partition/subvolume with a distinct key that is retrieved from the PAM.
This achieves two things: I know that I am typing my password into the OS that I or a trusted third party compiled (not one planted by a hacker), and my home directory gets decrypted as part of my normal login routine.