In particular the fact that often when a publication turns out to have industry value, a company is formed around it to commercialize it: both to extract profit from it, and to make it accessible and legible by companies. Companies by and large don't take academic papers off arXiv and implement them.
The rest are funded through grants, which have the side effect of directing a sizeable chunk of the academics time to writing grant applications rather than science. I think that would be a regrettable outcome for Open Source.