The string won't break apart, because the forces that are holding it together are so much stronger than the "force" that is pulling our universe apart.
Unfortunately, it doesn't answer your more fundamental question of "if I make 2 marks in space, and then those expand apart, what is in the new space, and how do I know they really are farther apart?"
I have never heard a good description of this on human scales, only at stellar and galactic scales.