Plenty, though it depends a bit on what you count as JS standard library.
An object’s prototype may be null, so things like Object.getPrototypeOf(), Object.setPrototypeOf(), Object.create() and .__proto__ all deal with null.
Anything that is accessing a named property that exists on a class will yield null for no value, never undefined.
This is seen in DOM methods; things like Node.firstChild and Node.parentNode spring to mind as potentially null, and in each case it would be semantically quite wrong for them to be undefined—they are defined, as “no value”.