(Edit: Some of the IntelliJ operations are distinctly superior to the Eclipse ones. But not all. In my experience I'd say they're about even here.)

For example, in Eclipse it's trivial to take an inner class and move it to its own file. In IntelliJ that doesn't seem to be an option.

And that's a breaking change if I do it manually, which is where the Problems panel is so useful.

Not forgetting TDD where in Eclipse I can write multiple tests for a feature before any code exists and run them before the unit I'm testing even fully compiles!

For example, in this screenshot one of the methods the test class invokes doesn't exist: https://paperstack.com/img/ides/eclipse_run_broken_code.png