Suppose free will is real, and a person makes the decision and then takes the action. The brain waves marking that the decision was made HAVE to show up before the person is aware that they have made a decision, because both their awareness has to be 'signaled' by a brain wave coming from a decision. The deciding process, the decision, the awareness of the decision, and the actual brain signal to move the muscle ALL come from the brain, and will all feedback to each other. Any awareness that you have made a decision would show up in brainwaves BEFORE you are able to articulate it, since you can't articulate something that hasn't been experienced by your brain yet.
The only thing this sort of experiment could disprove is the idea that free will comes from something OUTSIDE your brain. If we believe your brain represents everything that you are (in terms of thoughts and consciousness), then anything the brain signals can't come BEFORE you have exercised free will, since the signal IS your free will.
I am very confused as to how anyone could think your brain waves could disprove free will.