But they should be compared. As you indicated and the statistics show the death primarily happen when people are impaired (drugs and alcohol, fatigue, distractions etc), the machines substitute these human errors by fewer and further apart potential engineering faults. With proper Root Cause Analysis of the investigations (helped with all the data collected of all the accidents), overtime fewer and fewer would be expected.
If you can go from 30000 to 1000 just by changing to good enough autonomous cars that's a change worth doing. Then you can look at improving it to 0 and encourage that process if not through insurance liability processes through regulations that require ongoing improvement in autonomous safety.