> not talking about "religion" per se [...] following the words of Christ as found in the Bible
We're in some danger of getting no-true-Scotsmanned here, since it's by no means straightforward to determine who is and isn't actually "following the words of Christ as found in the Bible".
Still, let's consider Uganda, where being (actively) homosexual is now punishable by life imprisonment thanks largely to the activism of Christians following the words they find in the Bible. (Not specifically "the words of Christ", but actually that's a bit you just made up; what code4life said was "the new testament Biblical principles".) Now, for all I know you may think this is a good law, and I'm not going to try to change your mind if so -- but what it obviously isn't is an improvement in freedom.
Or consider the long and sad history of how Christians, following the principles they found in the Bible, have tried to prevent schoolteachers telling their pupils accurately about certain areas of science. Again, you might agree with the people who made the laws in question that, e.g., evolution is a damnable atheistic error, but these laws very plainly reduced people's freedom. (In more recent years, as a result of having one such measure after another struck down in the courts, antievolutionists have shifted tactics, and since roughly the 1990s their preferred legal measures haven't been particularly anti-freedom. But that's only because their attempts to get their way by impeding teachers' freedom stopped working.)
> During this time, scripture was taken away from the people and mainly transmitted between clergy in a dead language
I think that's a rather tendentious way of putting it. What happened, rather, was that Latin-as-vernacular largely died out but the prevailing Bible translations remained in Latin. Not a matter of scripture being taken away from the people, but of the people moving away from the language used for the scriptures. (And from written language in general; literacy was very low in Europe after the fall of the Roman Empire. Providing vernacular bibles might not have done anyone much good.)
So, anyway, it's true that mediaeval people generally didn't have Bibles. But they did go to church, where those clergy were supposed to expound on doctrines derived from the Bible, and they did have a culture saturated with Christian ideas. And, actually, it's not even so clear that they didn't have vernacular Bible translations. Take a look here (apologies for the outrageously long Google Books link):
https://books.google.co.uk/books?id=2pSGAgAAQBAJ&pg=PA178&lp...
"To be sure, the Protestant Reformation did achieve a change in the way the Bible was read and the way it functioned within Christian spirituality, but this change was largely due to a long medieval tradition of lay access to biblical texts."